PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0007.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 208aa    MW: 23270.1 Da    PI: 5.0287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55.2e-161665255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          ykGVr +  +g+WvAeIr p++   r r++lg++++  +Aa+a +aa  +l+g
  Kaladp0048s0007.1.p 16 LYKGVRKRN-WGKWVAEIRLPNS---RDRIWLGSYDSQVKAARAFDAAIYCLRG 65
                         59****887.**********933...5**********99*************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.71E-261575No hitNo description
Gene3DG3DSA:3.30.730.101.5E-271675IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-191675IPR016177DNA-binding domain
SMARTSM003801.5E-291679IPR001471AP2/ERF domain
PROSITE profilePS5103220.7711673IPR001471AP2/ERF domain
PfamPF008471.6E-91765IPR001471AP2/ERF domain
PRINTSPR003677.1E-81728IPR001471AP2/ERF domain
PRINTSPR003677.1E-83955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MAGGGGGGDS DSSSKLYKGV RKRNWGKWVA EIRLPNSRDR IWLGSYDSQV KAARAFDAAI  60
YCLRGSGAKF NFPHSPPDFR ITRPLTNTEI QEIAASYANQ EPRRSSGVED VQQSTSSHFE  120
ELNFDHNDSS NSSSSMWGGN EGQIDWPLWN CLLDNVTDYR YPSPEYNSFL PYQSDQYNSF  180
GHSGYESGSD EGYSQHSNLS LWNFQGY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002324785.19e-47hypothetical protein POPTR_0018s08320g
SwissprotQ84QC24e-39ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLB9IKF61e-46B9IKF6_POPTR; Uncharacterized protein
STRINGPOPTR_0018s08320.13e-46(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-39ERF family protein